Variant: 13:39531390-A-G
Variation Class:SNV (single nucleotide variation)
Reference allele:A
Ancestral allele:A
Alt. Allele:G
Alt. Allele Frequency:0.499723(55918/111898)
dbSNP:rs7327092
PGG.SNV:13:39531390-A-G

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39531390-A-G 13 39531390 A A G Tianjin 576 1142 0.504378 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Sichuan 733 1474 0.497286 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Shanghai 9081 17764 0.511202 Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Liaoning 1025 2178 0.470615 Northeast Han 2316 4868 0.47576
13:39531390-A-G 13 39531390 A A G Zhejiang 5036 9854 0.511061 Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Hunan 218 404 0.539604 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Hebei 1069 2172 0.492173 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Jiangsu 7372 14720 0.500815 Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Heilongjiang 898 1854 0.484358 Northeast Han 2316 4868 0.47576
13:39531390-A-G 13 39531390 A A G Henan 999 2062 0.484481 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Shaanxi 4371 9104 0.480119 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Shandong 2320 4722 0.491317 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Shanxi 1048 2184 0.479853 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Qinghai 0 2 0.0 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Singapore 3651 7212 0.50624 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Jiangxi 375 708 0.529661 Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Neimenggu 17 50 0.34 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Hubei 1656 3272 0.506112 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Guangxi 30 76 0.394737 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Beijing 7542 15394 0.489931 Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Xinjiang 91 170 0.535294 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Jilin 393 836 0.470096 Northeast Han 2316 4868 0.47576
13:39531390-A-G 13 39531390 A A G Hainan 9 14 0.642857 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Xianggang 1 4 0.25 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Guizhou 20 48 0.416667 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Guangdong 928 1790 0.518436 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Anhui 1807 3654 0.494527 Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Gansu 153 324 0.472222 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Yunnan 116 230 0.504348 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Ningxia 5 16 0.3125 Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G Xizang 1 2 0.5 Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Fujian 296 572 0.517483 South coast Han 8476 16460 0.514945
13:39531390-A-G 13 39531390 A A G Chongqing 520 1098 0.473588 Southwest Han 3264 6528 0.5

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39531390-A-G 13 39531390 A A G Central Han 13554 27676 0.489738
13:39531390-A-G 13 39531390 A A G Southwest Han 3264 6528 0.5
13:39531390-A-G 13 39531390 A A G Southeast Han 23671 46700 0.506874
13:39531390-A-G 13 39531390 A A G Northeast Han 2316 4868 0.47576
13:39531390-A-G 13 39531390 A A G Northwest Han 4637 9666 0.479723
13:39531390-A-G 13 39531390 A A G South coast Han 8476 16460 0.514945

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.