Variant: 13:39530212-T-G
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:G
Alt. Allele Frequency:0.061862(6758/109244)
dbSNP:rs61945537
PGG.SNV:13:39530212-T-G

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39530212-T-G 13 39530212 T T G Shandong 266 4616 0.057626 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Heilongjiang 122 1812 0.067329 Northeast Han 339 4816 0.07039
13:39530212-T-G 13 39530212 T T G Shaanxi 511 8918 0.0573 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Henan 141 2038 0.069185 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Shanghai 1094 17360 0.063018 Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Beijing 958 15036 0.063714 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Jiangsu 949 14366 0.066059 Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Hebei 110 2110 0.052133 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Jiangxi 56 706 0.07932 Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Hubei 198 3206 0.061759 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Guangdong 100 1778 0.056243 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Anhui 251 3594 0.069839 Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Chongqing 65 1056 0.061553 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Fujian 31 562 0.05516 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Guangxi 8 74 0.108108 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Hainan 0 14 0.0 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Zhejiang 660 9604 0.068721 Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Jilin 56 832 0.067308 Northeast Han 339 4816 0.07039
13:39530212-T-G 13 39530212 T T G Neimenggu 5 50 0.1 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Xianggang 0 4 0.0 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Xinjiang 15 168 0.089286 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Yunnan 7 218 0.03211 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Ningxia 1 16 0.0625 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Tianjin 64 1114 0.057451 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Qinghai 0 2 0.0 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Guizhou 4 48 0.083333 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Singapore 385 6982 0.055142 South coast Han 820 15930 0.051475
13:39530212-T-G 13 39530212 T T G Xizang 0 2 0.0 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Shanxi 122 2096 0.058206 Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Sichuan 74 1448 0.051105 Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G Liaoning 161 2172 0.074125 Northeast Han 339 4816 0.07039
13:39530212-T-G 13 39530212 T T G Gansu 24 324 0.074074 Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Hunan 24 402 0.059701 Southwest Han 372 6380 0.058307

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39530212-T-G 13 39530212 T T G Central Han 1661 27010 0.061496
13:39530212-T-G 13 39530212 T T G Northeast Han 339 4816 0.07039
13:39530212-T-G 13 39530212 T T G Northwest Han 556 9478 0.058662
13:39530212-T-G 13 39530212 T T G Southeast Han 3010 45630 0.065965
13:39530212-T-G 13 39530212 T T G Southwest Han 372 6380 0.058307
13:39530212-T-G 13 39530212 T T G South coast Han 820 15930 0.051475

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.