Variant: 13:39528723-G-A
Variation Class:SNV (single nucleotide variation)
Reference allele:G
Ancestral allele:G
Alt. Allele:A
Alt. Allele Frequency:0.39632(39437/99508)
dbSNP:rs7997113
PGG.SNV:13:39528723-G-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39528723-G-A 13 39528723 G G A Shandong 1839 4458 0.412517 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Yunnan 87 208 0.418269 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Guizhou 20 42 0.47619 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Shanghai 6340 16696 0.379732 Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Zhejiang 3487 9320 0.374142 Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Gansu 138 322 0.428571 Northwest Han 3824 9112 0.419666
13:39528723-G-A 13 39528723 G G A Sichuan 590 1436 0.410864 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Jiangxi 250 702 0.356125 Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Hunan 147 390 0.376923 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Tianjin 446 1084 0.411439 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Singapore 2582 6684 0.386296 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Hubei 1205 3098 0.388961 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Xianggang 3 4 0.75 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Chongqing 425 1046 0.40631 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Guangdong 657 1768 0.371606 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Beijing 5945 14548 0.408647 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Hebei 864 2070 0.417391 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Shaanxi 3601 8566 0.420383 Northwest Han 3824 9112 0.419666
13:39528723-G-A 13 39528723 G G A Fujian 220 546 0.40293 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Anhui 1323 3418 0.387068 Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Jilin 354 818 0.432763 Northeast Han 2000 4742 0.421763
13:39528723-G-A 13 39528723 G G A Shanxi 856 2054 0.416748 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Heilongjiang 731 1786 0.409295 Northeast Han 2000 4742 0.421763
13:39528723-G-A 13 39528723 G G A Henan 828 2002 0.413586 Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Guangxi 32 76 0.421053 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Xizang 1 2 0.5 Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Ningxia 9 16 0.5625 Northwest Han 3824 9112 0.419666
13:39528723-G-A 13 39528723 G G A Neimenggu 23 46 0.5 Northwest Han 3824 9112 0.419666
13:39528723-G-A 13 39528723 G G A Jiangsu 5461 13988 0.390406 Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Hainan 5 14 0.357143 South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Liaoning 915 2138 0.42797 Northeast Han 2000 4742 0.421763
13:39528723-G-A 13 39528723 G G A Xinjiang 53 162 0.32716 Northwest Han 3824 9112 0.419666

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
13:39528723-G-A 13 39528723 G G A Central Han 10778 26216 0.411123
13:39528723-G-A 13 39528723 G G A Southwest Han 2475 6222 0.397782
13:39528723-G-A 13 39528723 G G A Southeast Han 16861 44124 0.382128
13:39528723-G-A 13 39528723 G G A Northwest Han 3824 9112 0.419666
13:39528723-G-A 13 39528723 G G A South coast Han 3499 9092 0.384844
13:39528723-G-A 13 39528723 G G A Northeast Han 2000 4742 0.421763

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.