Variant: 18:10369715-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:C
Alt. Allele:T
Alt. Allele Frequency:0.002574(268/104106)
dbSNP:rs139752933
PGG.SNV:18:10369715-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10369715-C-T 18 10369715 C C T Hunan 0 400 0.0 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Liaoning 8 2178 0.003673 Northeast Han 19 4854 0.003914
18:10369715-C-T 18 10369715 C C T Zhejiang 30 9766 0.003072 Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Shaanxi 18 9024 0.001995 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Sichuan 4 1470 0.002721 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Shanghai 35 17638 0.001984 Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Tianjin 8 1120 0.007143 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Hainan 0 14 0.0 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Jilin 4 840 0.004762 Northeast Han 19 4854 0.003914
18:10369715-C-T 18 10369715 C C T Singapore 4 7132 5.61E-4 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Yunnan 0 228 0.0 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Xizang 0 2 0.0 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Ningxia 0 16 0.0 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Xinjiang 2 172 0.011628 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Qinghai 0 2 0.0 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Xianggang 0 4 0.0 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Guizhou 0 46 0.0 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Heilongjiang 7 1836 0.003813 Northeast Han 19 4854 0.003914
18:10369715-C-T 18 10369715 C C T Hebei 10 2148 0.004655 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Guangxi 0 74 0.0 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Chongqing 3 1096 0.002737 Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Shandong 16 4678 0.00342 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Fujian 3 566 0.0053 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Beijing 30 15212 0.001972 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Anhui 6 3618 0.001658 Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Shanxi 3 2146 0.001398 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Neimenggu 0 48 0.0 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Henan 9 2058 0.004373 Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T Jiangsu 41 14532 0.002821 Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Guangdong 7 1788 0.003915 South coast Han 14 9578 0.001462
18:10369715-C-T 18 10369715 C C T Gansu 3 322 0.009317 Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Jiangxi 8 706 0.011331 Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Hubei 9 3226 0.00279 Southwest Han 16 6468 0.002474

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10369715-C-T 18 10369715 C C T Southwest Han 16 6468 0.002474
18:10369715-C-T 18 10369715 C C T Northeast Han 19 4854 0.003914
18:10369715-C-T 18 10369715 C C T Southeast Han 120 46260 0.002594
18:10369715-C-T 18 10369715 C C T Northwest Han 23 9584 0.0024
18:10369715-C-T 18 10369715 C C T Central Han 76 27362 0.002778
18:10369715-C-T 18 10369715 C C T South coast Han 14 9578 0.001462

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.