Variant: 18:10369715-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:C
Alt. Allele:T
Alt. Allele Frequency:0.997436(110498/110782)
dbSNP:rs139752933
PGG.SNV:18:10369715-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10369715-C-T 18 10369715 C C T Hunan 400 400 1.0 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Liaoning 2170 2178 0.996327 Northeast Han 4835 4854 0.996086
18:10369715-C-T 18 10369715 C C T Zhejiang 9736 9766 0.996928 Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Shaanxi 9006 9024 0.998005 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Sichuan 1466 1470 0.997279 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Shanghai 17603 17638 0.998016 Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Tianjin 1112 1120 0.992857 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Hainan 14 14 1.0 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Jilin 836 840 0.995238 Northeast Han 4835 4854 0.996086
18:10369715-C-T 18 10369715 C C T Singapore 7128 7132 0.999439 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Yunnan 228 228 1.0 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Xizang 2 2 1.0 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Ningxia 16 16 1.0 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Xinjiang 170 172 0.988372 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Qinghai 2 2 1.0 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Xianggang 4 4 1.0 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Guizhou 46 46 1.0 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Heilongjiang 1829 1836 0.996187 Northeast Han 4835 4854 0.996086
18:10369715-C-T 18 10369715 C C T Hebei 2138 2148 0.995345 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Guangxi 74 74 1.0 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Chongqing 1093 1096 0.997263 Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Shandong 4662 4678 0.99658 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Fujian 563 566 0.9947 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Beijing 15182 15212 0.998028 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Anhui 3612 3618 0.998342 Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Shanxi 2143 2146 0.998602 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Neimenggu 48 48 1.0 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Henan 2049 2058 0.995627 Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T Jiangsu 14491 14532 0.997179 Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Guangdong 1781 1788 0.996085 South coast Han 16224 16254 0.998154
18:10369715-C-T 18 10369715 C C T Gansu 319 322 0.990683 Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Jiangxi 698 706 0.988669 Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Hubei 3217 3226 0.99721 Southwest Han 6452 6468 0.997526

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10369715-C-T 18 10369715 C C T Southwest Han 6452 6468 0.997526
18:10369715-C-T 18 10369715 C C T Northeast Han 4835 4854 0.996086
18:10369715-C-T 18 10369715 C C T Southeast Han 46140 46260 0.997406
18:10369715-C-T 18 10369715 C C T Northwest Han 9561 9584 0.9976
18:10369715-C-T 18 10369715 C C T Central Han 27286 27362 0.997222
18:10369715-C-T 18 10369715 C C T South coast Han 16224 16254 0.998154

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.