Variant: 18:10362444-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:T
Alt. Allele:T
Alt. Allele Frequency:0.714511(67557/94550)
dbSNP:rs451166
PGG.SNV:18:10362444-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10362444-C-T 18 10362444 C T T Tianjin 686 968 0.708678 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Zhejiang 5844 8050 0.725963 Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Shanghai 10861 15566 0.697739 Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Henan 1363 1910 0.713613 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Sichuan 959 1332 0.71997 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Jiangsu 8920 12290 0.725793 Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Shandong 2713 3722 0.728909 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Shaanxi 5433 7696 0.705951 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Heilongjiang 1178 1632 0.721814 Northeast Han 3205 4496 0.712856
18:10362444-C-T 18 10362444 C T T Hunan 249 360 0.691667 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Beijing 8908 12314 0.723404 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Hebei 1416 1976 0.716599 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Liaoning 1508 2108 0.71537 Northeast Han 3205 4496 0.712856
18:10362444-C-T 18 10362444 C T T Chongqing 680 1004 0.677291 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Guangxi 49 68 0.720588 South coast Han 10183 14344 0.709914
18:10362444-C-T 18 10362444 C T T Guangdong 1233 1746 0.706186 South coast Han 10183 14344 0.709914
18:10362444-C-T 18 10362444 C T T Shanxi 1374 1894 0.725449 Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Hubei 1992 2790 0.713978 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Jiangxi 473 694 0.681556 Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Yunnan 118 174 0.678161 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Qinghai 2 2 1.0 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Gansu 232 316 0.734177 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Jilin 519 756 0.686508 Northeast Han 3205 4496 0.712856
18:10362444-C-T 18 10362444 C T T Neimenggu 29 40 0.725 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Xinjiang 119 160 0.74375 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Anhui 1764 2400 0.735 Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Singapore 4746 6690 0.709417 South coast Han 10183 14344 0.709914
18:10362444-C-T 18 10362444 C T T Hainan 6 14 0.428571 South coast Han 10183 14344 0.709914
18:10362444-C-T 18 10362444 C T T Xianggang 2 4 0.5 South coast Han 10183 14344 0.709914
18:10362444-C-T 18 10362444 C T T Guizhou 26 42 0.619048 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Xizang 2 2 1.0 Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Ningxia 6 8 0.75 Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Fujian 345 488 0.706967 South coast Han 10183 14344 0.709914

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10362444-C-T 18 10362444 C T T Central Han 16460 22784 0.722437
18:10362444-C-T 18 10362444 C T T Southeast Han 27862 39000 0.71441
18:10362444-C-T 18 10362444 C T T Southwest Han 4026 5704 0.70582
18:10362444-C-T 18 10362444 C T T Northwest Han 5821 8222 0.707979
18:10362444-C-T 18 10362444 C T T Northeast Han 3205 4496 0.712856
18:10362444-C-T 18 10362444 C T T South coast Han 10183 14344 0.709914

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.