Variant: 18:10361777-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:C
Alt. Allele:C
Alt. Allele Frequency:0.710369(69126/97310)
dbSNP:rs427754
PGG.SNV:18:10361777-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10361777-T-C 18 10361777 T C C Shanghai 10951 15748 0.69539 Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Liaoning 1513 2128 0.710996 Northeast Han 3251 4586 0.708897
18:10361777-T-C 18 10361777 T C C Zhejiang 6062 8458 0.716718 Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Sichuan 973 1362 0.714391 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Hunan 252 366 0.688525 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Shandong 2782 3854 0.721847 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Heilongjiang 1213 1692 0.716903 Northeast Han 3251 4586 0.708897
18:10361777-T-C 18 10361777 T C C Hebei 1422 1992 0.713855 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Tianjin 713 1010 0.705941 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Henan 1365 1922 0.710198 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Shaanxi 5578 7938 0.702696 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Beijing 9208 12824 0.718029 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Jiangxi 472 694 0.680115 Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Shanxi 1404 1954 0.718526 Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Jiangsu 9176 12732 0.720704 Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Guangdong 1243 1762 0.705448 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Hubei 2038 2864 0.711592 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Guangxi 49 68 0.720588 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Chongqing 703 1036 0.678571 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Fujian 348 494 0.704453 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Gansu 236 318 0.742138 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Jilin 525 766 0.685379 Northeast Han 3251 4586 0.708897
18:10361777-T-C 18 10361777 T C C Hainan 6 14 0.428571 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Anhui 1812 2500 0.7248 Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Xinjiang 119 160 0.74375 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Neimenggu 33 44 0.75 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Xianggang 2 4 0.5 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Yunnan 123 182 0.675824 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Singapore 4768 6730 0.70847 South coast Han 10416 14710 0.70809
18:10361777-T-C 18 10361777 T C C Ningxia 7 10 0.7 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Qinghai 2 2 1.0 Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C Guizhou 26 42 0.619048 Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Xizang 2 2 1.0 Southwest Han 4117 5854 0.70328

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10361777-T-C 18 10361777 T C C Southeast Han 28473 40132 0.709484
18:10361777-T-C 18 10361777 T C C Northeast Han 3251 4586 0.708897
18:10361777-T-C 18 10361777 T C C Southwest Han 4117 5854 0.70328
18:10361777-T-C 18 10361777 T C C Central Han 16894 23556 0.717185
18:10361777-T-C 18 10361777 T C C Northwest Han 5975 8472 0.705264
18:10361777-T-C 18 10361777 T C C South coast Han 10416 14710 0.70809

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.