Variant: 18:10361322-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:C
Alt. Allele Frequency:0.115999(11273/97182)
dbSNP:rs62095175
PGG.SNV:18:10361322-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10361322-T-C 18 10361322 T T C Sichuan 198 1424 0.139045 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Shanghai 1651 15218 0.10849 Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Liaoning 295 2144 0.137593 Northeast Han 567 4578 0.123853
18:10361322-T-C 18 10361322 T T C Tianjin 81 938 0.086354 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Hunan 65 392 0.165816 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Shanxi 150 1800 0.083333 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Guangxi 12 64 0.1875 South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Beijing 1177 12434 0.09466 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Henan 259 2046 0.126588 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Heilongjiang 157 1594 0.098494 Northeast Han 567 4578 0.123853
18:10361322-T-C 18 10361322 T T C Gansu 37 308 0.12013 Northwest Han 1129 9164 0.123199
18:10361322-T-C 18 10361322 T T C Zhejiang 906 8360 0.108373 Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Jiangxi 116 694 0.167147 Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Shaanxi 1071 8630 0.124102 Northwest Han 1129 9164 0.123199
18:10361322-T-C 18 10361322 T T C Jilin 115 840 0.136905 Northeast Han 567 4578 0.123853
18:10361322-T-C 18 10361322 T T C Guangdong 242 1734 0.139562 South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Hebei 163 1872 0.087073 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Jiangsu 1862 13530 0.13762 Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Shandong 401 3916 0.1024 Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C Hubei 464 3240 0.14321 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Hainan 0 14 0.0 South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Anhui 241 2762 0.087256 Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Chongqing 116 968 0.119835 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Yunnan 13 144 0.090278 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Neimenggu 3 50 0.06 Northwest Han 1129 9164 0.123199
18:10361322-T-C 18 10361322 T T C Guizhou 2 42 0.047619 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Ningxia 0 16 0.0 Northwest Han 1129 9164 0.123199
18:10361322-T-C 18 10361322 T T C Xizang 0 2 0.0 Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Xinjiang 18 160 0.1125 Northwest Han 1129 9164 0.123199
18:10361322-T-C 18 10361322 T T C Singapore 953 6556 0.145363 South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Xianggang 0 2 0.0 South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Fujian 55 474 0.116034 South coast Han 1712 13658 0.125348

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10361322-T-C 18 10361322 T T C Southwest Han 858 6212 0.13812
18:10361322-T-C 18 10361322 T T C Southeast Han 4776 40564 0.11774
18:10361322-T-C 18 10361322 T T C Northeast Han 567 4578 0.123853
18:10361322-T-C 18 10361322 T T C Central Han 2231 23006 0.096975
18:10361322-T-C 18 10361322 T T C South coast Han 1712 13658 0.125348
18:10361322-T-C 18 10361322 T T C Northwest Han 1129 9164 0.123199

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.