Variant: 18:10362052-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:C
Alt. Allele:T
Alt. Allele Frequency:0.288313(27723/96156)
dbSNP:rs1652197
PGG.SNV:18:10362052-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10362052-C-T 18 10362052 C C T Shanghai 4776 15696 0.304281 Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Neimenggu 11 40 0.275 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Anhui 669 2462 0.27173 Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Hubei 812 2830 0.286926 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Gansu 82 318 0.257862 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Jiangxi 222 692 0.320809 Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Xianggang 2 4 0.5 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Hebei 565 1982 0.285066 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Chongqing 329 1022 0.321918 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Xinjiang 41 160 0.25625 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Ningxia 2 8 0.25 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Guizhou 16 42 0.380952 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Hainan 8 14 0.571429 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Qinghai 0 2 0.0 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Singapore 1954 6706 0.291381 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Guangxi 19 68 0.279412 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Xizang 0 2 0.0 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Shaanxi 2327 7830 0.29719 Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Yunnan 58 178 0.325843 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Beijing 3537 12618 0.280314 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Jilin 242 764 0.316754 Northeast Han 1326 4550 0.291429
18:10362052-C-T 18 10362052 C C T Hunan 114 364 0.313187 Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T Henan 551 1916 0.287578 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Shandong 1043 3786 0.275489 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Guangdong 515 1754 0.293615 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Tianjin 289 984 0.293699 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Shanxi 544 1944 0.279835 Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Heilongjiang 470 1666 0.282113 Northeast Han 1326 4550 0.291429
18:10362052-C-T 18 10362052 C C T Fujian 144 490 0.293878 South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Liaoning 614 2120 0.289623 Northeast Han 1326 4550 0.291429
18:10362052-C-T 18 10362052 C C T Zhejiang 2312 8298 0.278621 Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Jiangsu 3475 12546 0.276981 Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Sichuan 382 1340 0.285075 Southwest Han 1711 5778 0.296123

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10362052-C-T 18 10362052 C C T Southeast Han 11454 39694 0.288557
18:10362052-C-T 18 10362052 C C T Northwest Han 2463 8358 0.294688
18:10362052-C-T 18 10362052 C C T Southwest Han 1711 5778 0.296123
18:10362052-C-T 18 10362052 C C T South coast Han 4240 14546 0.291489
18:10362052-C-T 18 10362052 C C T Central Han 6529 23230 0.281059
18:10362052-C-T 18 10362052 C C T Northeast Han 1326 4550 0.291429

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.