Variant: 18:10359893-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:C
Alt. Allele Frequency:0.123104(12045/97844)
dbSNP:rs62095174
PGG.SNV:18:10359893-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10359893-T-C 18 10359893 T T C Fujian 58 478 0.121339 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Gansu 40 308 0.12987 Northwest Han 1059 8996 0.117719
18:10359893-T-C 18 10359893 T T C Hainan 0 14 0.0 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Yunnan 21 162 0.12963 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Sichuan 194 1406 0.13798 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Hebei 193 1886 0.102333 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Henan 255 2018 0.126363 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Xinjiang 17 160 0.10625 Northwest Han 1059 8996 0.117719
18:10359893-T-C 18 10359893 T T C Anhui 308 2860 0.107692 Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Shanghai 1956 15658 0.12492 Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Hunan 55 382 0.143979 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Beijing 1335 12658 0.105467 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Guangdong 262 1730 0.151445 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Shaanxi 998 8464 0.117911 Northwest Han 1059 8996 0.117719
18:10359893-T-C 18 10359893 T T C Tianjin 96 958 0.100209 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Liaoning 304 2140 0.142056 Northeast Han 600 4584 0.13089
18:10359893-T-C 18 10359893 T T C Hubei 419 3158 0.132679 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Chongqing 128 970 0.131959 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Neimenggu 4 50 0.08 Northwest Han 1059 8996 0.117719
18:10359893-T-C 18 10359893 T T C Guangxi 16 66 0.242424 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Jilin 106 816 0.129902 Northeast Han 600 4584 0.13089
18:10359893-T-C 18 10359893 T T C Xianggang 0 2 0.0 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Jiangsu 1795 13354 0.134417 Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Shandong 458 3984 0.11496 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Shanxi 173 1826 0.094743 Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Zhejiang 1038 8470 0.12255 Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Jiangxi 130 694 0.18732 Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Heilongjiang 190 1628 0.116708 Northeast Han 600 4584 0.13089
18:10359893-T-C 18 10359893 T T C Guizhou 2 40 0.05 Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Singapore 964 6586 0.146371 South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Ningxia 0 14 0.0 Northwest Han 1059 8996 0.117719

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10359893-T-C 18 10359893 T T C South coast Han 1830 13780 0.132801
18:10359893-T-C 18 10359893 T T C Northwest Han 1059 8996 0.117719
18:10359893-T-C 18 10359893 T T C Southwest Han 819 6118 0.133867
18:10359893-T-C 18 10359893 T T C Central Han 2510 23330 0.107587
18:10359893-T-C 18 10359893 T T C Southeast Han 5227 41036 0.127376
18:10359893-T-C 18 10359893 T T C Northeast Han 600 4584 0.13089

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.