Variant: 18:10359561-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:T
Alt. Allele:T
Alt. Allele Frequency:0.296258(30732/103734)
dbSNP:rs368705
PGG.SNV:18:10359561-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10359561-C-T 18 10359561 C T T Jiangxi 223 704 0.316761 Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Liaoning 616 2152 0.286245 Northeast Han 1397 4740 0.294726
18:10359561-C-T 18 10359561 C T T Chongqing 352 1076 0.327138 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Xianggang 2 4 0.5 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Shanghai 4959 16226 0.305621 Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Yunnan 67 202 0.331683 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Xinjiang 42 166 0.253012 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Anhui 793 2758 0.287527 Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Tianjin 331 1090 0.30367 Central Han 7372 25284 0.291568
18:10359561-C-T 18 10359561 C T T Zhejiang 2709 9236 0.293309 Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Shandong 1187 4152 0.285886 Central Han 7372 25284 0.291568
18:10359561-C-T 18 10359561 C T T Henan 575 1984 0.289819 Central Han 7372 25284 0.291568
18:10359561-C-T 18 10359561 C T T Heilongjiang 518 1784 0.290359 Northeast Han 1397 4740 0.294726
18:10359561-C-T 18 10359561 C T T Jilin 263 804 0.327114 Northeast Han 1397 4740 0.294726
18:10359561-C-T 18 10359561 C T T Sichuan 419 1424 0.294242 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Guizhou 20 46 0.434783 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Neimenggu 14 48 0.291667 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Hainan 8 14 0.571429 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Guangxi 20 72 0.277778 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Shaanxi 2599 8542 0.304261 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Hunan 122 388 0.314433 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Shanxi 606 2110 0.287204 Central Han 7372 25284 0.291568
18:10359561-C-T 18 10359561 C T T Guangdong 521 1780 0.292697 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Beijing 4064 13862 0.293176 Central Han 7372 25284 0.291568
18:10359561-C-T 18 10359561 C T T Fujian 169 540 0.312963 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Ningxia 4 12 0.333333 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Jiangsu 3972 13744 0.288999 Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Singapore 2040 6946 0.293694 South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Qinghai 0 2 0.0 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Hubei 889 3072 0.289388 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Xizang 0 2 0.0 Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T Gansu 85 318 0.267296 Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Hebei 609 2086 0.291946 Central Han 7372 25284 0.291568

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
18:10359561-C-T 18 10359561 C T T Southeast Han 12656 42668 0.296616
18:10359561-C-T 18 10359561 C T T Northeast Han 1397 4740 0.294726
18:10359561-C-T 18 10359561 C T T Southwest Han 1869 6210 0.300966
18:10359561-C-T 18 10359561 C T T South coast Han 4694 15744 0.298145
18:10359561-C-T 18 10359561 C T T Northwest Han 2744 9088 0.301937
18:10359561-C-T 18 10359561 C T T Central Han 7372 25284 0.291568

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.