Variant: 8:28466110-T-A
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:A
Alt. Allele Frequency:0.210402(21812/103668)
dbSNP:rs12549962
PGG.SNV:8:28466110-T-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28466110-T-A 8 28466110 T T A Shandong 908 4698 0.193274 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Xizang 1 2 0.5 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Ningxia 3 16 0.1875 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Yunnan 51 224 0.227679 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Jilin 158 834 0.189448 Northeast Han 968 4826 0.20058
8:28466110-T-A 8 28466110 T T A Xianggang 1 4 0.25 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Guangxi 15 74 0.202703 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Tianjin 227 1138 0.199473 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Hubei 704 3170 0.222082 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Xinjiang 38 172 0.22093 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Fujian 123 570 0.215789 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Shaanxi 1781 8978 0.198374 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Guangdong 412 1784 0.230942 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Hebei 418 2148 0.1946 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Guizhou 14 48 0.291667 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Gansu 60 324 0.185185 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Heilongjiang 350 1824 0.191886 Northeast Han 968 4826 0.20058
8:28466110-T-A 8 28466110 T T A Beijing 3084 15218 0.202655 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Anhui 807 3612 0.223422 Southeast Han 9897 45972 0.215283
8:28466110-T-A 8 28466110 T T A Jiangxi 170 706 0.240793 Southeast Han 9897 45972 0.215283
8:28466110-T-A 8 28466110 T T A Henan 433 2032 0.213091 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Zhejiang 2066 9632 0.214493 Southeast Han 9897 45972 0.215283
8:28466110-T-A 8 28466110 T T A Sichuan 319 1450 0.22 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Liaoning 460 2168 0.212177 Northeast Han 968 4826 0.20058
8:28466110-T-A 8 28466110 T T A Qinghai 1 2 0.5 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Hainan 7 14 0.5 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Hunan 81 400 0.2025 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Neimenggu 7 50 0.14 Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Chongqing 246 1086 0.226519 Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Shanxi 431 2162 0.199352 Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Singapore 1582 7106 0.222629 South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Jiangsu 3022 14392 0.209978 Southeast Han 9897 45972 0.215283
8:28466110-T-A 8 28466110 T T A Shanghai 3832 17630 0.217357 Southeast Han 9897 45972 0.215283

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28466110-T-A 8 28466110 T T A Central Han 5501 27396 0.200796
8:28466110-T-A 8 28466110 T T A Southwest Han 1416 6380 0.221944
8:28466110-T-A 8 28466110 T T A Northwest Han 1890 9542 0.198072
8:28466110-T-A 8 28466110 T T A Northeast Han 968 4826 0.20058
8:28466110-T-A 8 28466110 T T A South coast Han 2140 9552 0.224037
8:28466110-T-A 8 28466110 T T A Southeast Han 9897 45972 0.215283

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.