Variant: 8:28462390-G-A
Variation Class:SNV (single nucleotide variation)
Reference allele:G
Ancestral allele:G
Alt. Allele:A
Alt. Allele Frequency:0.012049(1190/98762)
dbSNP:rs146831260
PGG.SNV:8:28462390-G-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28462390-G-A 8 28462390 G G A Chongqing 13 1064 0.012218 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Singapore 47 6718 0.006996 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Shandong 52 4442 0.011706 Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Liaoning 43 2140 0.020093 Northeast Han 83 4732 0.01754
8:28462390-G-A 8 28462390 G G A Xizang 0 2 0.0 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Hubei 31 3080 0.010065 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Heilongjiang 27 1772 0.015237 Northeast Han 83 4732 0.01754
8:28462390-G-A 8 28462390 G G A Hainan 0 14 0.0 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Shanghai 220 16688 0.013183 Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Fujian 8 556 0.014388 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Qinghai 0 2 0.0 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Shaanxi 89 8508 0.010461 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Shanxi 24 2060 0.01165 Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Guangdong 47 1768 0.026584 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Zhejiang 119 9344 0.012735 Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Tianjin 19 1088 0.017463 Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Guizhou 0 46 0.0 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Ningxia 0 14 0.0 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Sichuan 20 1418 0.014104 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Jilin 13 820 0.015854 Northeast Han 83 4732 0.01754
8:28462390-G-A 8 28462390 G G A Henan 32 1990 0.01608 Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Guangxi 0 70 0.0 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Hunan 3 386 0.007772 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Jiangsu 159 13682 0.011621 Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Jiangxi 8 704 0.011364 Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Neimenggu 0 44 0.0 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Gansu 15 316 0.047468 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Anhui 22 3396 0.006478 Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Beijing 141 14192 0.009935 Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Xinjiang 7 162 0.04321 Northwest Han 111 9046 0.012271
8:28462390-G-A 8 28462390 G G A Xianggang 0 4 0.0 South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Yunnan 1 218 0.004587 Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A Hebei 30 2054 0.014606 Central Han 298 25826 0.011539

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28462390-G-A 8 28462390 G G A Southwest Han 68 6214 0.010943
8:28462390-G-A 8 28462390 G G A South coast Han 102 9130 0.011172
8:28462390-G-A 8 28462390 G G A Central Han 298 25826 0.011539
8:28462390-G-A 8 28462390 G G A Northeast Han 83 4732 0.01754
8:28462390-G-A 8 28462390 G G A Southeast Han 528 43814 0.012051
8:28462390-G-A 8 28462390 G G A Northwest Han 111 9046 0.012271

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.