Variant: 8:28459224-G-A
Variation Class:SNV (single nucleotide variation)
Reference allele:G
Ancestral allele:A
Alt. Allele:A
Alt. Allele Frequency:0.324568(33300/102598)
dbSNP:rs2028484
PGG.SNV:8:28459224-G-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28459224-G-A 8 28459224 G A A Shanghai 5687 17432 0.326239 Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Tianjin 343 1110 0.309009 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Liaoning 719 2158 0.333179 Northeast Han 1565 4780 0.327406
8:28459224-G-A 8 28459224 G A A Zhejiang 3104 9694 0.320198 Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Beijing 4763 15048 0.31652 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Shaanxi 2838 8748 0.324417 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Heilongjiang 577 1810 0.318785 Northeast Han 1565 4780 0.327406
8:28459224-G-A 8 28459224 G A A Guangxi 30 76 0.394737 South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Chongqing 362 1072 0.337687 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Xianggang 2 4 0.5 South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Sichuan 489 1442 0.339112 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Anhui 1208 3592 0.336303 Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Hunan 123 392 0.313776 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Qinghai 1 2 0.5 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Neimenggu 17 46 0.369565 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Guangdong 642 1780 0.360674 South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Hubei 1002 3148 0.318297 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Jiangxi 253 706 0.358357 Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Xinjiang 51 166 0.307229 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Yunnan 79 224 0.352679 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Shanxi 665 2124 0.313089 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Jiangsu 4640 14266 0.325249 Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Shandong 1469 4612 0.318517 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Guizhou 17 44 0.386364 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Xizang 0 2 0.0 Southwest Han 2072 6324 0.327641
8:28459224-G-A 8 28459224 G A A Hebei 664 2138 0.310571 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Henan 638 2022 0.315529 Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Fujian 182 552 0.32971 South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Jilin 269 812 0.331281 Northeast Han 1565 4780 0.327406
8:28459224-G-A 8 28459224 G A A Gansu 97 318 0.305031 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Ningxia 5 16 0.3125 Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A Hainan 5 14 0.357143 South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Singapore 2359 7028 0.335657 South coast Han 3220 9454 0.340597

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28459224-G-A 8 28459224 G A A Southeast Han 14892 45690 0.325936
8:28459224-G-A 8 28459224 G A A Central Han 8542 27054 0.315739
8:28459224-G-A 8 28459224 G A A Northeast Han 1565 4780 0.327406
8:28459224-G-A 8 28459224 G A A Northwest Han 3009 9296 0.323688
8:28459224-G-A 8 28459224 G A A South coast Han 3220 9454 0.340597
8:28459224-G-A 8 28459224 G A A Southwest Han 2072 6324 0.327641

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.