Variant: 8:28458637-G-A
Variation Class:SNV (single nucleotide variation)
Reference allele:G
Ancestral allele:G
Alt. Allele:A
Alt. Allele Frequency:0.00604(623/103146)
dbSNP:rs146128489
PGG.SNV:8:28458637-G-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28458637-G-A 8 28458637 G G A Chongqing 4 1080 0.003704 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Yunnan 1 220 0.004545 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Ningxia 0 16 0.0 Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Tianjin 5 1108 0.004513 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Hainan 0 14 0.0 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Singapore 41 7014 0.005845 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Hebei 15 2116 0.007089 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Jiangxi 7 708 0.009887 Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Jiangsu 81 14446 0.005607 Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Guangdong 14 1786 0.007839 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Hubei 23 3218 0.007147 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Guangxi 1 72 0.013889 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Jilin 9 828 0.01087 Northeast Han 48 4814 0.009971
8:28458637-G-A 8 28458637 G G A Neimenggu 0 46 0.0 Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Shanghai 95 17544 0.005415 Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Heilongjiang 17 1812 0.009382 Northeast Han 48 4814 0.009971
8:28458637-G-A 8 28458637 G G A Sichuan 9 1446 0.006224 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Xinjiang 1 168 0.005952 Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Beijing 73 15056 0.004849 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Shaanxi 69 8914 0.007741 Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Henan 12 2038 0.005888 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Shandong 30 4628 0.006482 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Shanxi 12 2120 0.00566 Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A Hunan 4 398 0.01005 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Liaoning 22 2174 0.01012 Northeast Han 48 4814 0.009971
8:28458637-G-A 8 28458637 G G A Anhui 18 3590 0.005014 Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Guizhou 0 48 0.0 Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Xianggang 0 4 0.0 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Qinghai 0 2 0.0 Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Zhejiang 58 9646 0.006013 Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Fujian 2 564 0.003546 South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Gansu 0 322 0.0 Northwest Han 70 9468 0.007393

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28458637-G-A 8 28458637 G G A Southwest Han 41 6410 0.006396
8:28458637-G-A 8 28458637 G G A Northwest Han 70 9468 0.007393
8:28458637-G-A 8 28458637 G G A Central Han 147 27066 0.005431
8:28458637-G-A 8 28458637 G G A South coast Han 58 9454 0.006135
8:28458637-G-A 8 28458637 G G A Southeast Han 259 45934 0.005639
8:28458637-G-A 8 28458637 G G A Northeast Han 48 4814 0.009971

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.