Variant: 8:28455119-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:N
Alt. Allele:C
Alt. Allele Frequency:0.323075(33037/102258)
dbSNP:rs7819621
PGG.SNV:8:28455119-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28455119-T-C 8 28455119 T N C Liaoning 714 2178 0.327824 Northeast Han 1545 4772 0.323764
8:28455119-T-C 8 28455119 T N C Fujian 175 538 0.325279 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Gansu 96 316 0.303797 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Henan 648 2054 0.315482 Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Shanghai 5532 17100 0.323509 Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Xinjiang 53 166 0.319277 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Xianggang 2 4 0.5 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Qinghai 1 2 0.5 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Neimenggu 17 48 0.354167 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Shaanxi 2903 8936 0.324866 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Tianjin 341 1096 0.311131 Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Shandong 1405 4490 0.312918 Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Guizhou 13 38 0.342105 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Hunan 123 398 0.309045 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Shanxi 639 2060 0.310194 Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Hebei 655 2130 0.307512 Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Hainan 5 14 0.357143 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Singapore 2405 7168 0.335519 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Jiangsu 4693 14438 0.325045 Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Heilongjiang 557 1764 0.31576 Northeast Han 1545 4772 0.323764
8:28455119-T-C 8 28455119 T N C Jilin 274 830 0.33012 Northeast Han 1545 4772 0.323764
8:28455119-T-C 8 28455119 T N C Chongqing 346 1048 0.330153 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Yunnan 71 210 0.338095 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Sichuan 493 1458 0.338134 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Anhui 1171 3496 0.334954 Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Xizang 0 2 0.0 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Jiangxi 252 706 0.356941 Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Zhejiang 3110 9742 0.319236 Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Ningxia 5 16 0.3125 Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Hubei 1046 3252 0.321648 Southwest Han 2092 6406 0.326569
8:28455119-T-C 8 28455119 T N C Guangdong 637 1778 0.358268 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Guangxi 29 76 0.381579 South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Beijing 4626 14706 0.314565 Central Han 8314 26536 0.31331

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28455119-T-C 8 28455119 T N C Northeast Han 1545 4772 0.323764
8:28455119-T-C 8 28455119 T N C South coast Han 3253 9578 0.339632
8:28455119-T-C 8 28455119 T N C Northwest Han 3075 9484 0.32423
8:28455119-T-C 8 28455119 T N C Central Han 8314 26536 0.31331
8:28455119-T-C 8 28455119 T N C Southeast Han 14758 45482 0.32448
8:28455119-T-C 8 28455119 T N C Southwest Han 2092 6406 0.326569

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.