Variant: 8:28451227-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:T
Alt. Allele:T
Alt. Allele Frequency:0.443563(35006/78920)
dbSNP:rs12676854
PGG.SNV:8:28451227-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28451227-C-T 8 28451227 C T T Jilin 352 742 0.474394 Northeast Han 2049 4480 0.457366
8:28451227-C-T 8 28451227 C T T Zhejiang 3622 8194 0.442031 Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T Xianggang 2 4 0.5 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Ningxia 4 10 0.4 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Henan 840 1872 0.448718 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Singapore 2443 5762 0.423985 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Hainan 4 14 0.285714 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Qinghai 1 2 0.5 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Beijing 4088 9304 0.439381 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Hebei 880 1918 0.458811 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Jiangxi 329 678 0.485251 Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T Xizang 1 2 0.5 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Shanghai 5408 12350 0.437895 Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T Yunnan 75 166 0.451807 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Anhui 730 1642 0.44458 Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T Shaanxi 3408 7648 0.445607 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Gansu 148 300 0.493333 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Jiangsu 4701 10550 0.445592 Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T Liaoning 945 2086 0.45302 Northeast Han 2049 4480 0.457366
8:28451227-C-T 8 28451227 C T T Guizhou 21 40 0.525 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Sichuan 603 1296 0.465278 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Shandong 1484 3286 0.451613 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Fujian 221 486 0.454733 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Tianjin 412 1014 0.406312 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Chongqing 444 1018 0.436149 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Xinjiang 65 144 0.451389 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Heilongjiang 752 1652 0.455206 Northeast Han 2049 4480 0.457366
8:28451227-C-T 8 28451227 C T T Guangdong 796 1732 0.459584 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Hunan 153 342 0.447368 Southwest Han 2460 5532 0.444685
8:28451227-C-T 8 28451227 C T T Neimenggu 22 44 0.5 Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Guangxi 36 64 0.5625 South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Shanxi 853 1890 0.451323 Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Hubei 1163 2668 0.435907 Southwest Han 2460 5532 0.444685

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28451227-C-T 8 28451227 C T T Northeast Han 2049 4480 0.457366
8:28451227-C-T 8 28451227 C T T Southeast Han 14790 33414 0.442629
8:28451227-C-T 8 28451227 C T T South coast Han 3502 8062 0.434384
8:28451227-C-T 8 28451227 C T T Northwest Han 3648 8148 0.447717
8:28451227-C-T 8 28451227 C T T Central Han 8557 19284 0.443736
8:28451227-C-T 8 28451227 C T T Southwest Han 2460 5532 0.444685

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.