Variant: 8:28451042-T-A
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:A
Alt. Allele Frequency:0.006118(625/102164)
dbSNP:rs143071404
PGG.SNV:8:28451042-T-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28451042-T-A 8 28451042 T T A Liaoning 25 2158 0.011585 Northeast Han 48 4794 0.010013
8:28451042-T-A 8 28451042 T T A Zhejiang 62 9516 0.006515 Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Shanghai 92 17312 0.005314 Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Tianjin 10 1116 0.008961 Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Hunan 5 400 0.0125 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Shaanxi 56 8814 0.006354 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Jiangsu 76 14230 0.005341 Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Beijing 59 14920 0.003954 Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Jiangxi 13 708 0.018362 Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Guangdong 30 1784 0.016816 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Henan 21 2028 0.010355 Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Hubei 18 3198 0.005629 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Guangxi 0 74 0.0 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Shanxi 17 2126 0.007996 Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Gansu 3 320 0.009375 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Hainan 0 14 0.0 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Chongqing 7 1080 0.006481 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Jilin 6 820 0.007317 Northeast Han 48 4794 0.010013
8:28451042-T-A 8 28451042 T T A Anhui 12 3534 0.003396 Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Xinjiang 0 170 0.0 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Fujian 6 558 0.010753 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Neimenggu 0 50 0.0 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Ningxia 0 14 0.0 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Guizhou 0 46 0.0 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Heilongjiang 17 1816 0.009361 Northeast Han 48 4794 0.010013
8:28451042-T-A 8 28451042 T T A Qinghai 0 2 0.0 Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A Xianggang 0 4 0.0 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Yunnan 1 206 0.004854 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Singapore 30 6972 0.004303 South coast Han 66 9406 0.007017
8:28451042-T-A 8 28451042 T T A Xizang 0 2 0.0 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Sichuan 14 1440 0.009722 Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Shandong 30 4596 0.006527 Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Hebei 15 2136 0.007022 Central Han 152 26922 0.005646

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28451042-T-A 8 28451042 T T A Northeast Han 48 4794 0.010013
8:28451042-T-A 8 28451042 T T A Southeast Han 255 45300 0.005629
8:28451042-T-A 8 28451042 T T A Central Han 152 26922 0.005646
8:28451042-T-A 8 28451042 T T A Southwest Han 45 6372 0.007062
8:28451042-T-A 8 28451042 T T A Northwest Han 59 9370 0.006297
8:28451042-T-A 8 28451042 T T A South coast Han 66 9406 0.007017

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.