Variant: 8:28445539-A-G
Variation Class:SNV (single nucleotide variation)
Reference allele:A
Ancestral allele:G
Alt. Allele:G
Alt. Allele Frequency:0.261696(26694/102004)
dbSNP:rs352419
PGG.SNV:8:28445539-A-G

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28445539-A-G 8 28445539 A G G Zhejiang 2506 9512 0.263457 Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G Guangdong 465 1786 0.260358 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Chongqing 286 1088 0.262868 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Shanxi 545 2118 0.257318 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Hunan 119 400 0.2975 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Shandong 1187 4506 0.263427 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Henan 527 2042 0.25808 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Sichuan 386 1420 0.271831 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Shanghai 4489 17180 0.261292 Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G Shaanxi 2311 8864 0.260718 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Liaoning 582 2174 0.267709 Northeast Han 1297 4818 0.269199
8:28445539-A-G 8 28445539 A G G Heilongjiang 498 1816 0.274229 Northeast Han 1297 4818 0.269199
8:28445539-A-G 8 28445539 A G G Tianjin 270 1118 0.241503 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Hebei 584 2128 0.274436 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Gansu 89 320 0.278125 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Hainan 1 14 0.071429 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Neimenggu 11 50 0.22 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Guangxi 25 74 0.337838 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Anhui 827 3342 0.247457 Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G Jiangsu 3713 14330 0.259107 Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G Beijing 3892 14840 0.262264 Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Hubei 822 3188 0.257842 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Jiangxi 203 706 0.287535 Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G Ningxia 6 14 0.428571 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Xianggang 1 4 0.25 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Xinjiang 44 166 0.26506 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Yunnan 64 224 0.285714 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Fujian 159 562 0.282918 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Jilin 217 828 0.262077 Northeast Han 1297 4818 0.269199
8:28445539-A-G 8 28445539 A G G Singapore 1849 7140 0.258964 South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Qinghai 0 2 0.0 Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Guizhou 15 46 0.326087 Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Xizang 1 2 0.5 Southwest Han 1693 6368 0.265861

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
8:28445539-A-G 8 28445539 A G G Southeast Han 11738 45070 0.260439
8:28445539-A-G 8 28445539 A G G South coast Han 2500 9580 0.26096
8:28445539-A-G 8 28445539 A G G Southwest Han 1693 6368 0.265861
8:28445539-A-G 8 28445539 A G G Central Han 7005 26752 0.26185
8:28445539-A-G 8 28445539 A G G Northwest Han 2461 9416 0.261364
8:28445539-A-G 8 28445539 A G G Northeast Han 1297 4818 0.269199

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.