Variant: 1:6595690-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:T
Alt. Allele:C
Alt. Allele Frequency:0.027913(2123/76058)
dbSNP:rs12024749
PGG.SNV:1:6595690-T-C
gnomAD:1:6595690-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6595690-T-C 1 6595690 T T C tian_jin 10 736 0.013587 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C fu_jian 10 392 0.02551 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C yun_nan 9 206 0.043689 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C he_bei 20 1324 0.015106 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C hu_bei 88 2858 0.030791 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C singapore 332 7094 0.0468 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C jiang_su 334 12742 0.026213 Southeast Han 917 35076 0.026143
1:6595690-T-C 1 6595690 T T C xi_zang 0 2 0.0 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C liao_ning 5 402 0.012438 Northeast Han 28 1854 0.015102
1:6595690-T-C 1 6595690 T T C qing_hai 0 2 0.0 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C hai_nan 0 2 0.0 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C si_chuan 7 264 0.026515 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C gui_zhou 5 44 0.113636 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C shan_xi 33 1440 0.022917 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C guang_xi 1 40 0.025 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C ji_lin 9 388 0.023196 Northeast Han 28 1854 0.015102
1:6595690-T-C 1 6595690 T T C shang_hai 302 12062 0.025037 Southeast Han 917 35076 0.026143
1:6595690-T-C 1 6595690 T T C ning_xia 0 14 0.0 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C hei_long_jiang 14 1064 0.013158 Northeast Han 28 1854 0.015102
1:6595690-T-C 1 6595690 T T C nei_meng_gu 2 50 0.04 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C chong_qing 20 486 0.041152 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C gan_su 0 62 0.0 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C jiang_xi 2 96 0.020833 Southeast Han 917 35076 0.026143
1:6595690-T-C 1 6595690 T T C he_nan 16 848 0.018868 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C guang_dong 14 228 0.061404 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C hu_nan 11 254 0.043307 Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C shan_dong 71 3592 0.019766 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C bei_jing 210 10446 0.020103 Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C xin_jiang 1 30 0.033333 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C zhe_jiang 205 7462 0.027473 Southeast Han 917 35076 0.026143
1:6595690-T-C 1 6595690 T T C shaan_xi 40 1986 0.020141 Northwest Han 43 2144 0.020056
1:6595690-T-C 1 6595690 T T C xiang_gang 0 4 0.0 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C tai_wan 278 6724 0.041344 South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C an_hui 74 2714 0.027266 Southeast Han 917 35076 0.026143

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6595690-T-C 1 6595690 T T C Central China Han 360 18386 0.01958
1:6595690-T-C 1 6595690 T T C South coast Han 635 14484 0.043841
1:6595690-T-C 1 6595690 T T C Southwest Han 140 4114 0.03403
1:6595690-T-C 1 6595690 T T C Southeast Han 917 35076 0.026143
1:6595690-T-C 1 6595690 T T C Northeast Han 28 1854 0.015102
1:6595690-T-C 1 6595690 T T C Northwest Han 43 2144 0.020056

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.