Variant: 1:6581877-G-A
Variation Class:SNV (single nucleotide variation)
Reference allele:G
Ancestral allele:G
Alt. Allele:A
Alt. Allele Frequency:0.779296(59161/75916)
dbSNP:rs7540913
PGG.SNV:1:6581877-G-A
gnomAD:1:6581877-G-A

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6581877-G-A 1 6581877 G G A yun_nan 166 206 0.805825 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A fu_jian 306 388 0.78866 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A he_bei 1049 1320 0.794697 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A tian_jin 579 736 0.786685 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A hu_bei 2249 2848 0.789677 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A singapore 5310 7074 0.750636 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A jiang_su 9954 12712 0.78304 Southeast Han 27392 35018 0.782226
1:6581877-G-A 1 6581877 G G A xi_zang 2 2 1.0 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A liao_ning 322 402 0.800995 Northeast Han 1486 1852 0.802376
1:6581877-G-A 1 6581877 G G A qing_hai 2 2 1.0 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A hai_nan 2 2 1.0 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A si_chuan 209 262 0.79771 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A gui_zhou 34 44 0.772727 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A shan_xi 1143 1432 0.798184 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A guang_xi 29 40 0.725 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A ji_lin 318 390 0.815385 Northeast Han 1486 1852 0.802376
1:6581877-G-A 1 6581877 G G A shang_hai 9391 12048 0.779465 Southeast Han 27392 35018 0.782226
1:6581877-G-A 1 6581877 G G A ning_xia 9 14 0.642857 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A hei_long_jiang 846 1060 0.798113 Northeast Han 1486 1852 0.802376
1:6581877-G-A 1 6581877 G G A nei_meng_gu 39 50 0.78 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A chong_qing 372 480 0.775 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A gan_su 50 62 0.806452 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A jiang_xi 69 96 0.71875 Southeast Han 27392 35018 0.782226
1:6581877-G-A 1 6581877 G G A he_nan 685 848 0.807783 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A guang_dong 174 230 0.756522 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A hu_nan 201 254 0.791339 Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A shan_dong 2830 3592 0.787862 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A bei_jing 8212 10448 0.785988 Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A xin_jiang 22 30 0.733333 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A zhe_jiang 5818 7448 0.781149 Southeast Han 27392 35018 0.782226
1:6581877-G-A 1 6581877 G G A shaan_xi 1576 1980 0.79596 Northwest Han 1698 2138 0.7942
1:6581877-G-A 1 6581877 G G A xiang_gang 3 4 0.75 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A tai_wan 5030 6698 0.75097 South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A an_hui 2160 2714 0.795873 Southeast Han 27392 35018 0.782226

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6581877-G-A 1 6581877 G G A Southwest Han 3233 4096 0.789307
1:6581877-G-A 1 6581877 G G A South coast Han 10854 14436 0.75187
1:6581877-G-A 1 6581877 G G A Central China Han 14498 18376 0.788964
1:6581877-G-A 1 6581877 G G A Southeast Han 27392 35018 0.782226
1:6581877-G-A 1 6581877 G G A Northeast Han 1486 1852 0.802376
1:6581877-G-A 1 6581877 G G A Northwest Han 1698 2138 0.7942

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.