Variant: 1:6349875-C-T
Variation Class:SNV (single nucleotide variation)
Reference allele:C
Ancestral allele:C
Alt. Allele:T
Alt. Allele Frequency:0.008352(634/75912)
dbSNP:rs1999835
PGG.SNV:1:6349875-C-T
gnomAD:1:6349875-C-T

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6349875-C-T 1 6349875 C C T tian_jin 6 734 0.008174 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T yun_nan 1 206 0.004854 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T he_bei 17 1324 0.01284 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T fu_jian 8 392 0.020408 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T hu_bei 15 2862 0.005241 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T singapore 57 7096 0.008033 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T jiang_su 106 12722 0.008332 Southeast Han 263 34998 0.007515
1:6349875-C-T 1 6349875 C C T xi_zang 0 2 0.0 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T liao_ning 4 402 0.00995 Northeast Han 19 1854 0.010248
1:6349875-C-T 1 6349875 C C T qing_hai 0 2 0.0 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T hai_nan 0 2 0.0 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T si_chuan 1 262 0.003817 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T gui_zhou 0 44 0.0 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T shan_xi 15 1436 0.010446 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T guang_xi 0 40 0.0 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T ji_lin 4 390 0.010256 Northeast Han 19 1854 0.010248
1:6349875-C-T 1 6349875 C C T shang_hai 73 12010 0.006078 Southeast Han 263 34998 0.007515
1:6349875-C-T 1 6349875 C C T ning_xia 0 14 0.0 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T hei_long_jiang 11 1062 0.010358 Northeast Han 19 1854 0.010248
1:6349875-C-T 1 6349875 C C T nei_meng_gu 0 50 0.0 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T chong_qing 4 488 0.008197 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T gan_su 1 62 0.016129 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T jiang_xi 1 96 0.010417 Southeast Han 263 34998 0.007515
1:6349875-C-T 1 6349875 C C T he_nan 8 846 0.009456 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T guang_dong 1 230 0.004348 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T hu_nan 3 254 0.011811 Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T shan_dong 39 3576 0.010906 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T bei_jing 96 10398 0.009233 Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T xin_jiang 0 30 0.0 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T zhe_jiang 70 7468 0.009373 Southeast Han 263 34998 0.007515
1:6349875-C-T 1 6349875 C C T shaan_xi 21 1984 0.010585 Northwest Han 22 2142 0.010271
1:6349875-C-T 1 6349875 C C T xiang_gang 0 4 0.0 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T tai_wan 59 6722 0.008777 South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T an_hui 13 2702 0.004811 Southeast Han 263 34998 0.007515

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6349875-C-T 1 6349875 C C T Central China Han 181 18314 0.009883
1:6349875-C-T 1 6349875 C C T Southwest Han 24 4118 0.005828
1:6349875-C-T 1 6349875 C C T South coast Han 125 14486 0.008629
1:6349875-C-T 1 6349875 C C T Southeast Han 263 34998 0.007515
1:6349875-C-T 1 6349875 C C T Northeast Han 19 1854 0.010248
1:6349875-C-T 1 6349875 C C T Northwest Han 22 2142 0.010271

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.