Variant: 1:6011757-T-C
Variation Class:SNV (single nucleotide variation)
Reference allele:T
Ancestral allele:C
Alt. Allele:C
Alt. Allele Frequency:0.14333(10865/75804)
dbSNP:rs6662680
PGG.SNV:1:6011757-T-C
gnomAD:1:6011757-T-C

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6011757-T-C 1 6011757 T C C tian_jin 104 724 0.143646 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C fu_jian 48 388 0.123711 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C he_bei 167 1308 0.127676 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C yun_nan 34 202 0.168317 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C hu_bei 392 2842 0.137931 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C singapore 1068 7078 0.15089 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C jiang_su 1836 12708 0.144476 Southeast Han 5054 35016 0.144334
1:6011757-T-C 1 6011757 T C C xi_zang 0 2 0.0 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C liao_ning 55 402 0.136816 Northeast Han 265 1844 0.143709
1:6011757-T-C 1 6011757 T C C qing_hai 0 2 0.0 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C hai_nan 0 2 0.0 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C si_chuan 29 262 0.110687 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C gui_zhou 6 44 0.136364 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C shan_xi 205 1424 0.143961 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C guang_xi 10 40 0.25 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C ji_lin 47 390 0.120513 Northeast Han 265 1844 0.143709
1:6011757-T-C 1 6011757 T C C shang_hai 1732 12070 0.143496 Southeast Han 5054 35016 0.144334
1:6011757-T-C 1 6011757 T C C ning_xia 5 14 0.357143 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C hei_long_jiang 163 1052 0.154943 Northeast Han 265 1844 0.143709
1:6011757-T-C 1 6011757 T C C nei_meng_gu 7 50 0.14 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C chong_qing 69 484 0.142562 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C gan_su 10 62 0.16129 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C jiang_xi 12 96 0.125 Southeast Han 5054 35016 0.144334
1:6011757-T-C 1 6011757 T C C guang_dong 33 228 0.144737 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C he_nan 106 838 0.126492 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C hu_nan 40 252 0.15873 Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C shan_dong 510 3584 0.142299 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C bei_jing 1438 10440 0.137739 Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C xin_jiang 5 30 0.166667 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C zhe_jiang 1082 7428 0.145665 Southeast Han 5054 35016 0.144334
1:6011757-T-C 1 6011757 T C C shaan_xi 251 1964 0.1278 Northwest Han 278 2122 0.131008
1:6011757-T-C 1 6011757 T C C xiang_gang 1 4 0.25 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C tai_wan 1008 6676 0.150989 South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C an_hui 392 2714 0.144436 Southeast Han 5054 35016 0.144334

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6011757-T-C 1 6011757 T C C Central China Han 2530 18318 0.138116
1:6011757-T-C 1 6011757 T C C South coast Han 2168 14416 0.150388
1:6011757-T-C 1 6011757 T C C Southwest Han 570 4088 0.139432
1:6011757-T-C 1 6011757 T C C Southeast Han 5054 35016 0.144334
1:6011757-T-C 1 6011757 T C C Northeast Han 265 1844 0.143709
1:6011757-T-C 1 6011757 T C C Northwest Han 278 2122 0.131008

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.