Variant: 1:6000230-A-G
Variation Class:SNV (single nucleotide variation)
Reference allele:A
Ancestral allele:G
Alt. Allele:G
Alt. Allele Frequency:0.934683(71006/75968)
dbSNP:rs12734220
PGG.SNV:1:6000230-A-G
gnomAD:1:6000230-A-G

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Province Level Genetic Region Level
Province Alt Allele
Count
Individual
Count
Alt Allele
Frequency
Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6000230-A-G 1 6000230 A G G tian_jin 696 738 0.943089 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G he_bei 1248 1314 0.949772 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G fu_jian 362 392 0.923469 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G yun_nan 186 204 0.911765 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G hu_bei 2668 2854 0.934828 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G singapore 6495 7082 0.917114 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G jiang_su 11925 12726 0.937058 Southeast Han 32800 35042 0.93602
1:6000230-A-G 1 6000230 A G G xi_zang 2 2 1.0 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G liao_ning 382 402 0.950249 Northeast Han 1759 1852 0.949784
1:6000230-A-G 1 6000230 A G G qing_hai 2 2 1.0 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G hai_nan 2 2 1.0 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G si_chuan 238 260 0.915385 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G gui_zhou 39 44 0.886364 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G shan_xi 1335 1432 0.932263 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G guang_xi 37 40 0.925 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G ji_lin 362 388 0.93299 Northeast Han 1759 1852 0.949784
1:6000230-A-G 1 6000230 A G G shang_hai 11252 12054 0.933466 Southeast Han 32800 35042 0.93602
1:6000230-A-G 1 6000230 A G G ning_xia 14 14 1.0 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G hei_long_jiang 1015 1062 0.955744 Northeast Han 1759 1852 0.949784
1:6000230-A-G 1 6000230 A G G nei_meng_gu 49 50 0.98 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G chong_qing 461 488 0.944672 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G gan_su 58 62 0.935484 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G jiang_xi 93 96 0.96875 Southeast Han 32800 35042 0.93602
1:6000230-A-G 1 6000230 A G G he_nan 800 848 0.943396 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G guang_dong 212 228 0.929825 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G hu_nan 236 254 0.929134 Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G shan_dong 3395 3588 0.94621 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G bei_jing 9812 10440 0.939847 Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G xin_jiang 26 30 0.866667 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G zhe_jiang 7003 7454 0.939496 Southeast Han 32800 35042 0.93602
1:6000230-A-G 1 6000230 A G G shaan_xi 1866 1986 0.939577 Northwest Han 2015 2144 0.939832
1:6000230-A-G 1 6000230 A G G xiang_gang 4 4 1.0 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G tai_wan 6204 6716 0.923764 South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G an_hui 2527 2712 0.931785 Southeast Han 32800 35042 0.93602

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.

Prevalence of province populations

Chart
SNV Chrom Position Ref. Ancestral
allele
Alt. Genetic
Region
Alt Allele
Count
Individual
Count
Alt Allele
Frequency
1:6000230-A-G 1 6000230 A G G Central China Han 17286 18360 0.941503
1:6000230-A-G 1 6000230 A G G South coast Han 13316 14464 0.920631
1:6000230-A-G 1 6000230 A G G Southwest Han 3830 4106 0.932781
1:6000230-A-G 1 6000230 A G G Southeast Han 32800 35042 0.93602
1:6000230-A-G 1 6000230 A G G Northeast Han 1759 1852 0.949784
1:6000230-A-G 1 6000230 A G G Northwest Han 2015 2144 0.939832

The above section provides alternative allele frequency (AAF) information for selected variant cross world-wide populations whose genomes as well the variant have been included in the database. In the AAF distribution map, each pie represents the allele frequency for a population. Users can custom the populations, data sets and ancestries to show or not show the corresponding pies. The figure is interactive, and users can operated the items in the figure to get detailed information or download the figure. For example, by hovering a mouse in each pie, it return to you the population name that the pie represents and give you the frequencies and genotypes in detail. By switching figure to table in the top right corner, the web returns the detailed information in table format. Users can use the “export to” button to download the table in a suitable format.